rs30940277 SNP Detail

Summary

• ID
  rs30940277
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89255980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGATCACTT TAAAATCCTG GCATGTTGCA GAATTAAACA
  TAAAAGAAAA ATCACGGACT TCTAGGAGCT GTGTGTTTCA GGTGGAAATG ACTCTTTGAC
  W
  AGGGTAGAAG ATCACAAAAT TCAGAGGAAG AGACAGAACA TACTGAAGGC ATTCGGATGT
  AAAACTCAGG GAGACAAACA ACACAGACCA AAATGAAAAC                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	PWD/PhJ	WSB/EiJ
ss47999619	NES11911143	PERLEGEN	MM_PANEL2	f	SNP	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	PWD/PhJ	WSB/EiJ
rs30940277					SNP	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47999619	NES11911143	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89255980 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr634089	regulatory region 634089	1454 bp proximal