rs30939313 SNP Detail

Summary

• ID
  rs30939313
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89255871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGTCTTAC TGTGTAGCTT
  TATCTATCCA GGAACTCTCT ATGTAAACCA AGCTGGCCAC AAACTTGTAG AAATGTTCTG
  GGATTAAAGG TATGAGCTAG CATGCCTAGC AAAAGTAGAA CTTTCTAGAA AGGAGAAAAA
  AAAATATATA TATGCCATTC TTTTTTGATA ACATGACAAA TAATAAAAAT AAAATTCTTA
  R
  TTCAAGGATA GATCACTTTA AAATCCTGGC ATGTTGCAGA ATTAAACATA AAAGAAAAAT
  CACGGACTTC TAGGAGCTGT GTGTTTCAGG TGGAAATGAC TCTTTGACAA GGGTAGAAGA
  TCACAAAATT CAGAGGAAGA GACAGAACAT ACTGAAGGCA TTCGGATGTA AAACTCAGGG
  AGACAAACAA CACAGACCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	MOLF/EiJ	PWD/PhJ
ss47999615	NES11911140	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	MOLF/EiJ	PWD/PhJ
rs30939313					SNP	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47999615	NES11911140	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89255871 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr634089	regulatory region 634089	1563 bp proximal