rs30938829 SNP Detail

Summary

• ID
  rs30938829
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50579585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGGTTCAGAT TCACAGTTGC CTAGGTGGAG CCCTTAGAAA CAATGAAAGC CAATTTGGCT
  ACTTAGGGTC CAAGGCATGC ATAGGTAGGA TAGCCTCTGC CAGTCACTTG CAGGGTAGTG
  GCTTTCTTTG GTTGAATCAG TGTCCCTTGC ACTGCAGCTG AAGCTTTTTC TTAGGATTGA
  ATCGGGTAGA ACTTAGGGTG ATTTGACCAA GAAGAGACTT TTATGAGATG TGCAGCAAAT
  CCCTACTAAG ACATGCAGCT TTTTTGTTTT GTTTTTGTTT TTGTTTTTTT TTTGTTTTTT
  K
  TTTTTTGTTT TTTCCGAAAC AGGGTTTCTC TGAATAGCCC TGGCTGTCCT GGAACTCACT
  TGTAGACCAG GCTGGCCTTG AACTCAGAAA TCCACCTGCC TCTGCCTCTG CTGCCTCCCG
  AGTGCTGGGA TTAAAGGGGT GTGCCACCAT GCCCGGCGCA GCTTTGTTAT AAATACCTTC
  TTTATAGCCA GTGTTGGAAG TGTCTGAGTC TCTTCTGATA CAGGAGGTCA TGCTGCATGG
  TAATTCATTT TATGTTGTCT TCCTTTCTGG TGTTAAAATT CCACCTAGAG AAGAAACTAG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45979347	mCV24540467	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30938829					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50579585 () rs orientation: forward

Symbol	Name	Function Class
Gm38807	predicted gene, 38807	within coordinates
Rr630049	regulatory region 630049	632 bp distal
Rr630050	regulatory region 630050	789 bp distal