rs30938782 SNP Detail

Summary

• ID
  rs30938782
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:14953897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGG ATTGGAGGAA GGGGTATTTT
  M
  GAGGGAAAGG ACAAAGACAG AGGAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45480253	mCV23564261	ABI	CRAMUS_MOUSE	f	SNP	C	C
ss134618330	ENSMUSSNP5668591	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320667966	CHEV_3_14888837	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30938782					SNP	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14953897 () rs orientation: forward

Symbol	Name	Function Class
Car2	carbonic anhydrase 2	Intron
Rr573724	regulatory region 573724	1263 bp distal
Rr573726	regulatory region 573726	1647 bp distal
Rr573727	regulatory region 573727	1594 bp distal
Rr573728	regulatory region 573728	1412 bp distal
Rr573729	regulatory region 573729	within coordinates
Rr573730	regulatory region 573730	232 bp proximal
Tssr28467	transcription start site region 28467	1978 bp downstream
Tssr28468	transcription start site region 28468	1421 bp downstream