rs30937562 SNP Detail

Summary

• ID
  rs30937562
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50892687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATAATTGCT AACTTTGTGA GATGTCGGAA CACGGCCACT
  TATGTAAAGC AAAGTGCCTT TCGACATTTA TGAAGTGCAG ATTCTCTATA AATACAGGAG
  R
  GTGCTAATCA CCCAAGCACC CCTAGGCACA GTAGATCAAT ACTGAAGATG AATACTCCTC
  TTTCATTGAA ATTCAGAAGG AAAAAAAATC CATTTGTTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45481394	mCV24861001	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss135170029	ENSMUSSNP1628760	ENSEMBL	ENSEMBL_Sanger	f	SNP				G
ss320761257	CHEV_3_50789188	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30937562					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50892687 () rs orientation: forward

Symbol	Name	Function Class
Rr576183	regulatory region 576183	1640 bp distal
Rr576184	regulatory region 576184	661 bp distal