rs30937349 SNP Detail

Summary

• ID
  rs30937349
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89258785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCAGTGTG GCTGCTGTTG
  GCAGATTAGT CTTCTTAATG GACCGACGTC CTTGGAGAAC CAAGAGCAGG ATATGCCTAA
  TAAAGTCATT ATTCTGCCGC CCAGCTGCGC GGGACGTGAG GATGAGAGAG GGAAGTGGAA
  ACTGGCACTG GGAGGTCTCC AGAGCAGGGA CAGACAACTG AGCCAGTTAA TTATCAAGCC
  R
  CAGACGCTGT AAACCTGCAT ACAAGCAGGT CCCAGCCGGA GGGGGCTCTT CAGAGCCTAG
  CCTCACTCCA TGGAGCTGGT GCAGAAAATG CAGCTTGGAG CACCCCAACC CCGAATTAGC
  TCACTCCCGG CAGGGCTAGT TTCTACCCTG ACTCTAAGCC TAAAGAAAGG GGGCTATGGA
  GGGGGGAGTC TAACCCCAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss47999639	NES11911047	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs30937349					SNP	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47999639	NES11911047	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89258785 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr634089	regulatory region 634089	949 bp distal
Rr634090	regulatory region 634090	within coordinates
Rr634091	regulatory region 634091	1447 bp proximal