rs30937345 SNP Detail

Summary

• ID
  rs30937345
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89258400 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAGC TGAGAATCAA GTTCCTAGAT
  S
  CAAGCCTTTA CCCAGCTCTT CCTAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss47999635	NES11911045	PERLEGEN	MM_PANEL2	f	SNP	G	G			C	C
ss133371326	ENSMUSSNP5933120	ENSEMBL	ENSEMBL_Sanger	f	SNP			C
ss321851840	CHEV_6_89231412	CHEVERUD	SCREENING_POP	f	SNP				G			C
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs30937345					SNP	G	G	C	G	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47999635	NES11911045	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89258400 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr634089	regulatory region 634089	564 bp distal
Rr634090	regulatory region 634090	98 bp proximal
Rr634091	regulatory region 634091	1832 bp proximal