rs30935573 SNP Detail

Summary

• ID
  rs30935573
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:30911950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTATT CAATGATGAC GACAGCCTAA
  R
  ATGAACGGGG ATGTACTTAA TCCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45480309	mCV25261609	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss320694186	CHEV_3_30756723	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs30935573					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:30911950 () rs orientation: forward

Symbol	Name	Function Class
Gm42199	predicted gene, 42199	1432 bp upstream
Gpr160	G protein-coupled receptor 160	Intron
Rr574831	regulatory region 574831	1891 bp distal
Rr574832	regulatory region 574832	1776 bp distal
Rr574833	regulatory region 574833	1444 bp distal
Rr574834	regulatory region 574834	1144 bp distal
Tssr28696	transcription start site region 28696	1799 bp downstream
Tssr28697	transcription start site region 28697	1794 bp downstream
Tssr28698	transcription start site region 28698	1775 bp downstream