rs30933236 SNP Detail

Summary

• ID
  rs30933236
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143889297 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTGAGATT TCTTAATACT
  CAAAAAGATA TTTATTTTAG AGCAAAGCTA AAATATGCAG GCAATCTAAA CCAGTTAATA
  TTTCAAGTTG GTGAAAGATA AAACACGATA TTTTAATATT TTAAGGGAAA AAGAAACTAG
  TTATAGGCCA TGGGATAAAG TGTATTGCTG TTAGAAACTG ACAACCTGTG TCCAGAGTTT
  M
  GACAGAAAAT GGGACATCAC AGTGCTGGAG ACAGGAGTGG AAAGAGTGCA CGTATCCATC
  CTGTACATAA CTTTTATGTA TTTTTAAAAA GATGTATTTA TTTATATTTA TATGCATACA
  CTGTAGCTGT CTTCAGACAC ATCAGAAGAA TGCATCGGAC CCCATTACAG ATGGTTGTGA
  GCCACCATGT GGTCGCTGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45480188	mCV23165745	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss136029124	ENSMUSSNP3983188	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30933236					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143889297 () rs orientation: forward

Symbol	Name	Function Class
Rr586593	regulatory region 586593	1098 bp distal
Rr586594	regulatory region 586594	1989 bp proximal