rs30928294 SNP Detail

Summary

• ID
  rs30928294
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138358343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGTTACAT CACCATGATT
  CACAGGGCAC AGGGATTCAA AAGACAAAGA ATATACAGGG GAAGTTTTCG GCACTCTGAG
  CTTTTCTGTG TAAAAATAGC CACCAAATAA TAACAGTTGA TGCCATAGGG ACTGGCATTG
  AAACAGTCTT CTTGTTCCTG GTTCTTACTT CTGTGAGGTG CAAGTCTTAG CTCATTCTTG
  Y
  TAGGTACTGC GCTGAAGTCA TTTGGGATCC TTTGAGGGAC TTCTGCAACT AGGGTTAAAA
  CTTCTAGTAT ACATTATGAC AATAATACTA TATTGACAGT AAATCTGAAC CTAATACGTA
  AAAAGGAAAT TCTGAAGTTA GGCCTAATTT AAACACACAT GCATAACTTG TTTTTATTTG
  TGTGTATGTC GGTGTGTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ
ss46998888	NES10882558	PERLEGEN	MM_PANEL2	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ
rs30928294					SNP	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46998888	NES10882558	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138358343 () rs orientation: forward

Symbol	Name	Function Class
Rr586176	regulatory region 586176	923 bp distal
Rr586177	regulatory region 586177	481 bp distal
Rr586178	regulatory region 586178	180 bp proximal
Rr586179	regulatory region 586179	1101 bp proximal