rs30926372 SNP Detail

Summary

• ID
  rs30926372
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138357614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCTCTGC TTTGAAAAGA
  ATGACAAATC AGGTCATGAT GGCTCATTTT CCCCTTTGAG CTTCGTGGGC TTTTGTTTGT
  TCCTTTGTTC GTTTTTTATC TCTTGATCCC TTTCCAAGAG ATGTGGGAGA CTCTCCTTTG
  CCTGGGCAGT CATCATCTGA CCCAACAGAG AGCTACAGTC TTATCACATA ACCAGACAAG
  R
  AAAGGAACCA CTTTTAGACA CCTGCCAAGA AATGACAATT CACTGCTGTA GGTGTCCCCC
  CACCCCCGCA CCCCCCCCTC CCCCGGCAGA AACTGCACCT TAGGATGGAT GGCCGCCTGT
  CTGTTACTTA TAGATATTCT AATCAGAACC TTCCATACCA CAGCAACTCG AGAGTGGTTA
  GCATTGGCTA ATGAGTAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ
ss46998876	NES10882552	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ
rs30926372					SNP	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46998876	NES10882552	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138357614 () rs orientation: forward

Symbol	Name	Function Class
Rr586176	regulatory region 586176	194 bp distal
Rr586177	regulatory region 586177	within coordinates
Rr586178	regulatory region 586178	909 bp proximal
Rr586179	regulatory region 586179	1830 bp proximal