rs30925675 SNP Detail

Summary

• ID
  rs30925675
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138403137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCGTGAGGC ATTATTAATG
  GAAACCTACT TGCAAACATT TTTATGATGA AGTCACATAC AAATAGAGGC TGTCTTAGGG
  TTCTATTGCT ATGGAGACAT ACCATGATCA CAGCAACTCT CATAAAGGAA ACCATTTAAT
  TGAGCCTGGC TTATGTTTCA GAAGTTCAAT CTGTTATCAT CATGATGGGA AGCATGGCCA
  S
  ATGCAGGTAG ACACAGTGTT GGAAAGGTAG CTGAGAGTTC TACACCCTGA TTGGCAGGCA
  ACAGGAAGAG ACAGTGTGCC TGCCTTGTGT AGACAGACTA TGCCTGACTT GAGCTTCTTA
  GACTTCAAAG CCCACCCTCA AGTGTCACAC TTCTTCCAAT AAGGCCACAC CTACTCCAAC
  AAGGCCACAC CTCCAATAAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46999156	NES10880984	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	G	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30925675					SNP	C	C	C	C	C	G	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46999156	NES10880984	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138403137 () rs orientation: forward

Symbol	Name	Function Class
Rr586184	regulatory region 586184	713 bp proximal