rs30924877 SNP Detail

Summary

• ID
  rs30924877
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138402774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATTTAATG TGTGTTCCTG
  AGTGGAAGTA TGTGCATCAC ATAGGTACCA TATCTGCAGA GTCTTGGAGA GGACATTGGA
  GCCTCTGGAA CTTGAGTTAT AGGCAGTTGT GAGCTACCCC GTGATGGGTG TTTGGAAATG
  AACCCTGGTT CTCCGGAAGT GCTCTTCACT GCTGAGGCAT CTTTCCAGGT CCCACCTTCA
  S
  TTTCTAACTT CATGTGTGGT GTGATGAAGG AACTTCCAGA CCCTTCTCCA TATCATGCTC
  TTTACCGAAT AGCCTGAGGT CTTAACGGAT TGCTTCTAGT TGGAAGAAGA GGCAAAAGCA
  AAACCTTCCA CTCATCATGA TAAATGCTGT GAGAAAAACC AATGCGTGAG GCATTATTAA
  TGGAAACCTA CTTGCAAACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ
ss46999148	NES10880979	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ
rs30924877					SNP	G	G	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46999148	NES10880979	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138402774 () rs orientation: forward

Symbol	Name	Function Class
Rr586184	regulatory region 586184	1076 bp proximal