rs30924582 SNP Detail

Summary

• ID
  rs30924582
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138352603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCTGCAC TTCGCCCCGG
  AGTGTTTAAT CTAGGTGATT CCAGTCTGAC CTGGTTCTAC AGCCACCTGT GAGAGTGGGT
  GACAGTTGCG AAGACGGTAA ACGTGCCGTG CCGCGTGTGC AAGATGGTAA AAGTGCCGTG
  TGTGTTAGGG CTAAAAGAGA GGAAGCAGGA ACTTAGCCAA GGAAACAGGA GCTGCACTTC
  M
  TAGTCTTGTT AGACCCACGC CTTCTAGCCA TCTTGAAGAA GCCACCTCTT GGTGGCACCA
  TATCATATCC CTACGAGCAA GAATGAGGGA TATTGATGGT GGCTTAGATG AAGCAGGTTG
  TGGGGGGAAA CTGGCCTCTG GACTGTGAGT GGGACACTCT ATAGAAAGCT AGCATTTCTT
  TGGCCTCCTT GTTTCTCCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	NZW/LacJ	PWD/PhJ
ss46998856	NES10882797	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	NZW/LacJ	PWD/PhJ
rs30924582					SNP	A	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46998856	NES10882797	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138352603 () rs orientation: forward

Symbol	Name	Function Class
Rr586173	regulatory region 586173	1118 bp distal
Rr586174	regulatory region 586174	1264 bp distal
Rr586175	regulatory region 586175	41 bp proximal