rs30923873 SNP Detail

Summary

• ID
  rs30923873
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138402601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAATATTT TCGTCATTTT
  TCAAGTTTAA ACCAATATTC CCCCTCCTTC CTACTGTGTG GAAGGAAAGA AATCCTATCT
  CCCCAGAAAT ACTGGCAGTC CATATCTATC AATGGGACAC ATAGTTGGGT CTGTGTGCCT
  TCACTTTTTA AAAAAAATAG GTTCATTATT TATGTATTTA ATGTGTGTTC CTGAGTGGAA
  R
  TATGTGCATC ACATAGGTAC CATATCTGCA GAGTCTTGGA GAGGACATTG GAGCCTCTGG
  AACTTGAGTT ATAGGCAGTT GTGAGCTACC CCGTGATGGG TGTTTGGAAA TGAACCCTGG
  TTCTCCGGAA GTGCTCTTCA CTGCTGAGGC ATCTTTCCAG GTCCCACCTT CAGTTTCTAA
  CTTCATGTGT GGTGTGATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ
ss46999144	NES10880977	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ
rs30923873					SNP	G	G	G	G	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46999144	NES10880977	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138402601 () rs orientation: forward

Symbol	Name	Function Class
Rr586184	regulatory region 586184	1249 bp proximal