rs30923871 SNP Detail

Summary

• ID
  rs30923871
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138402368 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACATATAT TATTTAACAC
  TCTGTTTTGG CTTCCTCTAA ATGTCCCATA GAATGTGGGA TTAGCAGGAC AGAAGCAGAA
  GAAAACTCAT GAAACTAAGA TCTTGTTGGG TTTTTTTTTT CCTATAACTT GTAATAAATT
  AGGTTTGCAA AGCTCCCAGC ATAAAGACTC CTTGAGAACA TTAATTCTGA AAAAGATATT
  R
  GTTGTTGCTC TCTTTTGAAA ATAAAACTTT CTTTAAATAT TTTCGTCATT TTTCAAGTTT
  AAACCAATAT TCCCCCTCCT TCCTACTGTG TGGAAGGAAA GAAATCCTAT CTCCCCAGAA
  ATACTGGCAG TCCATATCTA TCAATGGGAC ACATAGTTGG GTCTGTGTGC CTTCACTTTT
  TAAAAAAAAT AGGTTCATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ
ss46999142	NES10880976	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ
rs30923871					SNP	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46999142	NES10880976	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138402368 () rs orientation: forward

Symbol	Name	Function Class
Rr586184	regulatory region 586184	1482 bp proximal