rs30923869 SNP Detail

Summary

• ID
  rs30923869
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138402242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGCCTTGA AAAGAGGGAA
  ATTCTAGCAC AGTGACAATC TCAATGACAT TTGAGAAAAA CCCTTGTTTG AGAATATAAT
  ATGACTCTCC CAATTCTCTG AATTGGGTAT CTTGTTTTAT TTAATGGAAC ATATATTATT
  TAACACTCTG TTTTGGCTTC CTCTAAATGT CCCATAGAAT GTGGGATTAG CAGGACAGAA
  R
  CAGAAGAAAA CTCATGAAAC TAAGATCTTG TTGGGTTTTT TTTTTCCTAT AACTTGTAAT
  AAATTAGGTT TGCAAAGCTC CCAGCATAAA GACTCCTTGA GAACATTAAT TCTGAAAAAG
  ATATTAGTTG TTGCTCTCTT TTGAAAATAA AACTTTCTTT AAATATTTTC GTCATTTTTC
  AAGTTTAAAC CAATATTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss46999140	NES10880975	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs30923869					SNP	G	G	G	G	A	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46999140	NES10880975	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138402242 () rs orientation: forward

Symbol	Name	Function Class
Rr586184	regulatory region 586184	1608 bp proximal