rs30922703 SNP Detail

Summary

• ID
  rs30922703
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137335767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTGTGGAGAA TATGCCTATG TGACTGTGTG AGTCTACTGC AGCTCTCCTG CCATTAATTA
  CCCTTCATCT CAGTCTCAGG TTATCACGGT GGTGGGTTAT CACTGCACCC GAGGTATTTA
  TAGCAGTATA TTTCCATGGG AACATGTTGA AGCAGCTACC TGGCCTATTG CAGTTGAGTG
  CTGCGGGTAT TGGAAACTGG CTGAAGACTG TGAGGCTGTG TAGTGTGGGC TGAGATGTGA
  GGTTGGAACT GGCTGGCAGA CTAAAGCATG CTGGACATTG CTCGGGGAGG CTCTAGTCCA
  R
  GGATCTAGAG ACTGATCCCT AGTCTGGTTC TATTTTTATT TTGCAGGTAA TTTATGTGCT
  ACAATTTCTC TAACAGAATA ATGAACATTA TAAGCACTCC CTCCCCTCTG TCTAGAGCAG
  TGGTTCTCTT TTTTTTTTCT TGGTTTTTTC AAGATAGGGT TTCTCTGTGT AGCCCTGGCT
  GTCCTGGAAC TCACTCTGTA AACCAGGCTG GCCTCGAACT CAGAAATCCA CCTGCCTCTG
  TCTCCCAAGT GCTGGGATTA AAGGCGTGGG CCACCAATGC CTGGCTCGAG TAGTGGTTCT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46460296	mCV22993285	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30922703					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137335767 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr602660	regulatory region 602660			1095 bp proximal
Usp48	ubiquitin specific peptidase 48			Intron
				Noncoding-Transcript-Variant