rs30920502 SNP Detail

Summary

• ID
  rs30920502
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67476408 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTCATTTA TAAATAAGTG
  CATAAAGCAA CTGTAAACAT TCAAATAGAA CCATTCATGA TAACCTGTTT TTCTGATTCT
  CTCATCCCTT ATAGGGGAGG AAAAATACAA TGTGTTTACT TTCTGCAGTT GACTTTAATG
  CAGACTTCCA TGCATGTGGG CGGGGAGACC AGCAGATAGC CATATAGTTA ACACACAGAT
  R
  GATGCATGCA AAACAGGAGA GAAAACAAAT CCTAGTGGAT GGGAAGGGGG CCATGGACAC
  AGAACAGTCA TAAAAGGCAT TTGAAAAGTA GATTTATTAA AATAAATTTA TATTTACTTA
  TTAAAATAAA TTTATTAATA TAAGTTTGGT CATTTGTGTT AGATATTGAG TGTGCTATTT
  TATCCCCAGC ATGATATATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46997423	NES10780787	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30920502					SNP	A	A	A	A	G	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46997423	NES10780787	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67476408 () rs orientation: forward

Symbol	Name	Function Class
4930402C01Rik	RIKEN cDNA 4930402C01 gene	1490 bp downstream
Rr577947	regulatory region 577947	469 bp distal
Rr577948	regulatory region 577948	581 bp distal