rs30919698 SNP Detail

Summary

• ID
  rs30919698
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67473612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCAGCTGC CATTACAAGG
  GGTTGTGAGC TGCCAGTCTT GGAAACTGAA CTTTGGTCCA CTGAAAGAGC AGCATACTCT
  CTTAACTTCG GAGCCATTTC TCCAGCCCAG TTGATGTTGG TGATAACCTC CCAGACTGGA
  ACCCAAAGCG CACAACCTTG AGTGTCAGTC CTCACCTCGA GCCACTACTC TTGACCACTA
  M
  TGTGTGAGCC AGGCCAGCTG CCTGAGAGCT CCTGCGACTC TGTCTTTGCC TCACATCTTG
  CCTTAGTAAT GCTGGAATGA CAGATGTGCA CATCACATGG GTTATATGAA GGCAAACTAA
  GTTCCCTATG TTTGTGTGGC ACTTTAGCCG CTCAGCCATT TCACTGGCCC AGTGGAATCT
  TGATGTAATT TTAGTTTTCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46997409	NES10780905	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30919698					SNP	A	A	A	A	A	C	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46997409	NES10780905	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67473612 () rs orientation: forward

Symbol	Name	Function Class
Rr577945	regulatory region 577945	within coordinates
Rr577946	regulatory region 577946	1332 bp distal
Rr577947	regulatory region 577947	1826 bp proximal