rs30913672 SNP Detail

Summary

• ID
  rs30913672
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138041172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTACCATA CGACATAGTG
  CCTAGAGAAA CGACACGAGT ATGACTCAGG ATGCACTCAG TTCTCCAGAG GCATTTGTAG
  CATGATGGAT TTTGGGGTTG CCCCAACACA CCAGGTTTTC TGGGGGCCTC TGTACATAGA
  TGAGAGGGTC TTCTGCACTC CAGAGGCCCT CAGGTTCTTG TCAATCCCCA AGGAAATTCA
  R
  TTCCTGGCTC CCTGCTACAG TGTTACCTGA AAAAATTGAC TGTGTTTGAT CCCAAATAAA
  GGGTAGAAAT ACTATAACTC CATCCTGCCA CTATTCGGGC TGAGAGGTGA AAGTTTGATC
  AAAGGATGGA AGAACCAATA TTTGGTCTTG CCTATTTGTT ACCCTAAGGA AAATCGGGAT
  ATGGAAAGAA GCTAGGAGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46996966	NES10891623	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30913672					SNP	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46996966	NES10891623	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138041172 () rs orientation: forward

Symbol	Name	Function Class
Rr586126	regulatory region 586126	859 bp proximal