rs30911534 SNP Detail

Summary

• ID
  rs30911534
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121759126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCATATAAA CTTACTTTAA AATACAGATC AGGAGATATT
  TATAAGAGTC TTTTTAATTT AAAAATGAAC TTATTTTTGT GAATATTTGC AAATATCATC
  Y
  TTTGTATGAA GAATGGTAGC TATTATGTTT TTAGACAATT GAAGGATTAA GATCGTAAGA
  CCAAAATTTC CCATAAACAG CCCTACTAGA CTTCAAGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45479169	mCV25244694	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss135732793	ENSMUSSNP4344051	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss320907361	CHEV_3_121668395	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30911534					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121759126 () rs orientation: forward

Symbol	Name	Function Class
Arhgap29	Rho GTPase activating protein 29	Intron
Rr584209	regulatory region 584209	1449 bp distal
Rr584210	regulatory region 584210	969 bp distal
Rr584211	regulatory region 584211	1104 bp distal
Rr584212	regulatory region 584212	1853 bp proximal