rs30910878 SNP Detail

Summary

• ID
  rs30910878
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67384745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTAGCTA GGCCACACTT
  CCTAATCCTT TCAAATACTT ACACTCCCTG GTGACCAGGC GTTCAAATCT GTGAGCCTAT
  AGGGGCTGTT CTCATTCAAA CCTCCGTGTT TACTGTCTAA AAATGTATCA TTTATGTATG
  AAAAGCTGAA ACTGAGTAGA ACAAAAATCC TGGTGCTACT TTTGATATAT CCTGAAATTC
  S
  AAAGGTTGTG GAGCCATTCA GTGAGTGTGA GGCTAAATGC CTCACAACTG TGGCTGGCTT
  GGTGACTCAG AATTTACAGT CCTAACCCAA ACAGGGCTTG GGGAGTTCAG GTTTTACTTT
  ATGCCGATGC AAATGAAGTC CTTGCTCTGT TGTTAGCCAG TGAAATCAAT GTTAATGAAG
  TCCAGCTCAC ATCCGTAGCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46996553	NES10782968	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30910878					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46996553	NES10782968	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67384745 () rs orientation: forward

Symbol	Name	Function Class
Gm42568	predicted gene 42568	within coordinates
Rarres1	retinoic acid receptor responder (tazarotene induced) 1	1560 bp downstream