rs30910320 SNP Detail

Summary

• ID
  rs30910320
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100689214 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  ACATACCGTA TGTGTTCTTT TGTGACTGGG TTGCCTCACT CAGGATGATA TTTTCTAGTT
  CCATTCACTT GCCTGTGAAT TTCATTGTTT TTAATAGCTG AGTAGTATTC AATTGTGTAA
  ATGTACCACG TTTTCTGTAT CTGTTCCTCT GTTGAGGGAC ATCTGGGTTC TTTCCAGCCT
  CTGGCTACTA TAAATAAGAC TGCTATGAAC ATAGTGGGGC ATGTGTCCAT ATTACATGTT
  GGAGCATCTT CTGGGTATAT GCCCAGGAGT GTTATAACTG GGTCCTCAGG TAGTACTATA
  W
  CCAATTTTCT GAGGAACCAC CAGACTGACT TCCAGAGTGG TTGTACCAGC TTGTAATCCT
  ACCAGCAATG AAGGAGTGTT CTTCTTTCTC CACATCCTCG ACAGCATCTG CTGTCACCTG
  AGTTTTTGAT CTTAGCCATT CTGATTGGTG TGAGGTGGAA TCTCAGGGTT GTTTTGATTT
  GCATTTCCCT GATGACTTAG GATTTCTTTA GGTGCTTCTC AGCCATTCGA GTTTCCTCAG
  TTGAGAATTT TCTGTTTAGT TCTGTTCCCC ATTTTTTAAA ATAGGGTTAT TTGTTTCTCT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45479952	mCV22835761	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30910320					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100689214 () rs orientation: reverse

Symbol	Name	Function Class
Cachd1	cache domain containing 1	Intron
Rr596037	regulatory region 596037	1691 bp proximal