rs30908023 SNP Detail

Summary

• ID
  rs30908023
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143869456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGAAACC ACCAAACCTA
  ACAACGTGAG TTCAATTCCC AGACCCCACT TGGTGGTTAG TGGATGAAGA GAAACAACCC
  TTGCAGGCTG TCCTCTGACC TCCACATACA TGCTACGGTT TCTGTGTGTG CAGAGACAGA
  GAAGGAGAAA GAAAGGCAAA GACAGAGAAA AGGGAGGAGG AATAAATAAA TAAATATTTT
  W
  AAAAATATTT TCTTTATTAC CCACAACCCA TGGTTTTATA GTTCACAGAC CCCAAGTCTT
  TTTGACCAAA GTCAAAGTCT CTTGCCAATC AGCCTGTGTG AGTGAGGCGG GTGCTGAGCC
  TCTCATTGAG TGGACACAAT GCCAAAGGTA CGAGACCCCA CAAGGCTTTG GAATTCACTG
  TGCTTGTTAT GACACATGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45479733	mCV25051892	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss136029076	ENSMUSSNP4373282	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30908023					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143869456 () rs orientation: forward

Symbol	Name	Function Class
Gm34162	predicted gene, 34162	within coordinates
Rr586590	regulatory region 586590	160 bp proximal
Rr586591	regulatory region 586591	1044 bp proximal