ATAGAAGACT CCAGGTATGA TCAAGTATGC TTCAAGGCTG TGTCCTCAGC GGCTGCACGG AAAGCAGACG CAGACAGGAC TGCGTGGAAG AGACAAGCCC S GCAGAGTTAA ACAATAGAGG ATTACGACCA CCCGCAGGTA CTGGGTAAAC CAAACAGCCT CTGTGAACAG CTTTGAGGGG CCCAGATGAA AGGACCTGG S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
FVB/NJ |
LG/J |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss45975880 | mCV24802897 | ABI | CRAMUS_MOUSE | f | SNP | C | G | C | ||||||||||||
ss48065608 | NES11724101 | PERLEGEN | MM_PANEL2 | f | SNP | C | G | C | G | G | G | C | G | C | G | G | G | |||
ss321924623 | CHEV_6_118429037 | CHEVERUD | SCREENING_POP | f | SNP | C | C | |||||||||||||
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
FVB/NJ |
LG/J |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs30906652 | SNP | C | C | G | C | G | G | G | C | G | C | C | G | G | C | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss48065608 | NES11724101 | PERLEGEN | MM_PANEL | f | SNP | C/G |
Location: Chr6:118455980 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi17903 | CpG island 17903 | within coordinates | ||||||
Rr637483 | regulatory region 637483 | 698 bp distal | ||||||
Rr637484 | regulatory region 637484 | within coordinates | ||||||
Rr637485 | regulatory region 637485 | 291 bp proximal | ||||||
Rr637486 | regulatory region 637486 | 1490 bp proximal | ||||||
Rr637487 | regulatory region 637487 | 1651 bp proximal | ||||||
Tssr62662 | transcription start site region 62662 | 218 bp downstream | ||||||
Zfp9 | zinc finger protein 9 | Intron |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/18/2025 MGI 6.24 |
![]() |
|