rs30905290 SNP Detail

Summary

• ID
  rs30905290
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137954541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGTCACAC TATCTCTGCA
  TCCACTAACA CTCCCCGCCC CCATATTCCA GGGGCCCCAC ACCCAGCATC AAGTCACCCA
  TGGTGTATGC TGGTGTCATG GGTTCATGCC AGACAGAAAG AGATTACCCA AATTCTTCAG
  CCTAAAGATT GGTGGGCTTC AAGCAGAGCT AGATGACCAA GGAATCCATC CAGCATGTCA
  S
  TCCCCTTTCC AGAAGCTAGA GCGTCTTTAT TATCAAACTT TACAACAGAA AGAGCTGTTC
  TCAGCCAGTT GTAAAAGGGC CAGAGAACAA TGTGTGCTCT GCAGCTCTCC AAATGATTCT
  AATCTCCGGT TAGGAGCCCC CTGTAGAAGT CATCTGTGGA GACATCCATC CTTTCCATCT
  GGTGGACTTC CCTCCACCGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	MOLF/EiJ
ss46996292	NES10868758	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	MOLF/EiJ
rs30905290					SNP	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46996292	NES10868758	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137954541 () rs orientation: forward

Symbol	Name	Function Class
Rr586105	regulatory region 586105	within coordinates