rs30904619 SNP Detail

Summary

• ID
  rs30904619
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57521911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGAGCCAA GTTCCCTCCT
  GTGTAATCTT CATAAACAGT ATTCAAAAAA TGCTTTTTTG TCAGGGCAAT GAAGTGAAGG
  AACGAATAAT TATTTCTATG TAAACACATA ACAATAGAAA AGTACAAATA ATATTAGGAA
  AAACTGTTGT TTTGAAATCT GGAGTGCTAG AAGCCTATGG GTTTTTAACT TGTTGGAAAT
  R
  ACAACTAGCT TTGTAAACTC ACTAGTCTAT TCTGGGTCTC GTGCAAATGA CCCTTTGGAA
  TCTGAAGGTA ACAGTGTAAG AGATGACGAA AGGCATGTTT GTGGCTGGTT GTCAAGCAAC
  CAAAGGCAGA AGTTACTGGC ATGTACTCCT TTATTTTGTA CATGGAGTGG GTGTAGGTGC
  TTAACTGTGT TTCTATTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss45976646	mCV25134887	ABI	CRAMUS_MOUSE	f	SNP	G	A		A		A
ss51315053	NES13763334	PERLEGEN	MM_PANEL2	f	SNP		A	A		G		G	G	G
ss133241536	ENSMUSSNP1088553	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A				A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs30904619					SNP	G	A	A	A	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51315053	NES13763334	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57521911 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr631144	regulatory region 631144	1038 bp distal
Rr631145	regulatory region 631145	within coordinates