rs30904560 SNP Detail

Summary

• ID
  rs30904560
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137953580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTGAGAC AGGATTTCTC
  TCTATAACCC TGGTTGTCCT GGAACTCACT TTGTAGACCA GGTTGGCCTC AAACTCAAAA
  ATGTGCCTGC CTCTGCCCCC CAAGTGCTGG GATTAAAGGC GTGCACCACC ACCACCTGGC
  TTTGAAATCT TAACAGGGCT TAACATACCC TTCTCTTTGC TGCCCGGTCC GTGGACTCAC
  R
  CTGTCTCTCA CACTTAAGAT CCTGAAGGCT CCTTAGCAAA GAATCATAGG CGGTGGCCTA
  GAGTGTAGTC TCTCTGCCTG GAATTGCACC AGCTCAGAGC TGAGCTTCCA GAATTACCAC
  TTCCAGTGTT TCTGGGAACA TAGAATGAGC AGGATACTGG TTGCATTTAG AGGTCTCAAG
  ACCAAAAGGG AGGGCCAAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	MOLF/EiJ
ss46996282	NES10868745	PERLEGEN	MM_PANEL2	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	MOLF/EiJ
rs30904560					SNP	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46996282	NES10868745	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137953580 () rs orientation: forward

Symbol	Name	Function Class
Rr586105	regulatory region 586105	within coordinates