rs30903834 SNP Detail

Summary

• ID
  rs30903834
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:133292033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCAAAACACT CAGGCAAAAC ACTCAAACAT AAAAATAAAC TAAATACATC CTTAAAAAAG
  AAGTAAAAAG AATGTAACAT TTTAAAACGT CTTTTTCAAA GATTTATTTA TTATTATATG
  TAAGTACATG GTAGCTGTCT TCAGACACAC CAGAAGAGGG TGTCAGGTCT CATTATTGAT
  GGTTGTGAGC CACCATGTGG TTTCTGGGAG TTGAATTCAG GACTTTTGGA AGAGCAGTCA
  GTGCTCTTAA CCGCTGAGCC ACCTCTCCAG CCCCATTTTT TTTTTTTTTT TTTTTTTTGG
  K
  TTTTCGAGAC AGGGTGTAGC CTGTATAGCC CTGGCTGTCC TGGAACTCAC TCTGTAGACC
  AGGCTGGCCT CAAACTCAGA AATCCACCTG CCTCTGCCTC CCAAGTGCTG GGATTAAAGG
  TGTGCACCAC CACGCCCTGC TTTTTTTTTT TTTTTAACTT TTTATTGGTT CTTTGTGAAC
  CTCACATCAG GCACCCCAAT CCCACTCATG TTCCCCTCCG TCTGCCCCCC ACCTTTGCAA
  CCTCCCCCAC AACAGAGGAA ACAAAAAAAA AATCTCTTGT TGTGGAAGCT ATAGTGTGTC
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45478117	mCV23278128	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30903834					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:133292033 () rs orientation: forward

Symbol	Name	Function Class
Gm42567	predicted gene 42567	within coordinates
Rr585577	regulatory region 585577	1200 bp distal
Rr585578	regulatory region 585578	134 bp distal