rs30900919 SNP Detail

Summary

• ID
  rs30900919
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:28300768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA CACCCATCCC ATTGTTTGGT
  Y
  CATTAGGAGT CTTTGGTGTG ATTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45478090	mCV23335153	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	C
ss320690587	CHEV_3_28145541	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30900919					SNP	T	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28300768 () rs orientation: forward

Symbol	Name	Function Class
Gm37098	predicted gene, 37098	853 bp downstream
Rr574554	regulatory region 574554	1988 bp proximal
Tssr28642	transcription start site region 28642	1160 bp downstream