rs30899595 SNP Detail

Summary

• ID
  rs30899595
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90337075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAAGGTCTAT TCAGCAGTAT TCACCGATCT CTTTCAGTAT TCCCTCTCCC AGAATCGAAG
  AAAAAACATA GGCTTTACAG ATGAAGAAAC TGAGGCTCAG AGGGTTTGCC TCTGCTAAGA
  AAGTGTCATG TCTGGGATTC CCAGAGCTGC TCAAAGCTGG AGCCCTGGCT GCTCTCAGCA
  GTCAGGGGCA CTATGGCCTG TGAGAAAGAC ACACACACAC ATACACACAC ACACATACAC
  ACACACACAC ACACACACAC ACACACACAC ACACACAGAG AGAGAGAGAG AGAGGAGGGG
  R
  AAGGGCATAG GGGTGAGTAT GGGCTGGATC CAGGCAAGCC TCTCTGTCCT GAAGAGCCAA
  GTCCTTCCAT TAACCAGCTT CCCAGTACAT TCAGACGTCT GGCTTGGCCT CGTGCCCACC
  AAGACTAAAA TTCTTAGCTG CAACTCAGTC AGGTGGCTTT AATTAATGGA AAATGTGACC
  ATAGCGCATG TCCTAGCTGG AGAAAAAACA GCACAGAGAA GAGCTCCCTG GTTATTATGT
  GCGGGAGAGG GGATGAGTGT GACTGTTAAA GAGACTGAAA CTTGTCCCAA GCCTCACAAG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45975151	mCV23962494	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30899595					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90337075 () rs orientation: forward

Symbol	Name	Function Class
Rr634185	regulatory region 634185	368 bp distal
Rr634186	regulatory region 634186	within coordinates
Uroc1	urocanase domain containing 1	Intron