rs30896839 SNP Detail

Summary

• ID
  rs30896839
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:135814366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTA ATGAGAGAAT GGGCCCTTGG
  Y
  CCTGTGAAGA CTTGATGCTC CAGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45477361	mCV25139954	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss320972533	CHEV_3_135771569	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30896839					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135814366 () rs orientation: forward

Symbol	Name	Function Class
Bank1	B cell scaffold protein with ankyrin repeats 1	Intron
Rr585805	regulatory region 585805	968 bp proximal