rs30895213 SNP Detail

Summary

• ID
  rs30895213
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19372971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATCTTAAT CACAAGGATA
  AGAATTTGGT TAAATGCAAT TAAAACAACT CTTACAAAAT TTAGAAATCA ACTAATGCAA
  GAATTACTAA TATTCACAAT TCTTAGAATA GACTTGATAT ACAAATTTAG CCAACTTTAT
  AGTAAATTTT TCACTTGGGA ATAAGTGAGA ATTAGTAATT CTGGTTATTG CTTTCAAAAA
  M
  TGAAATGATG TTCAAGGTGA AAGCTTATTA ACAGGCAGGT ATGGTACTAC ATGCTTAGAG
  TCCAGTACTG TGAAGAGTGA GGCAGGTGAT CATGAGTTTG AGGCCAACCT AGAGCTACAT
  AGCAAGACAC TTTCTCTTGT CTAAAACAAT ACACAAAGGC TTTAATGAAT TTCCCCACGA
  CAAATAGTTT AATTAAAAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	MOLF/EiJ	MSM/Ms	PWD/PhJ	SM/J
ss45477497	mCV22547975	ABI	CRAMUS_MOUSE	f	SNP	A	A	C		A	A
ss46824895	NES10848035	PERLEGEN	MM_PANEL2	f	SNP			C	C				A		A
ss134666654	ENSMUSSNP356106	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C			A			A
ss320678412	CHEV_3_19218807	CHEVERUD	SCREENING_POP	f	SNP							A				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	MOLF/EiJ	MSM/Ms	PWD/PhJ	SM/J
rs30895213					SNP	A	A	C	C	A	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46824895	NES10848035	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19372971 () rs orientation: forward

Symbol	Name	Function Class
Gm66414	predicted gene, 66414	1997 bp downstream
Rr573974	regulatory region 573974	155 bp proximal