rs30894543 SNP Detail

Summary

• ID
  rs30894543
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131743898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTT CACGAGGCTC CTGAATGAAC
  M
  GGAGCTTCCA CAGGGAGCTT CCGCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45476746	mCV23621014	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	C
ss135907964	ENSMUSSNP697284	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss320968397	CHEV_3_131701101	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30894543					SNP	A	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131743898 () rs orientation: forward

Symbol	Name	Function Class
Gm29949	predicted gene, 29949	within coordinates
Gm64577	predicted gene, 64577	within coordinates
Rr585407	regulatory region 585407	46 bp distal