rs30892812 SNP Detail

Summary

• ID
  rs30892812
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127797003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGCAGAT TGGATTTCCA
  AATGAGGAAA GCGCATTCTA GTTCTTTCTT GGCTACGGAT AAACACAATT GATTTATGAT
  GAATATGAGG GTCCTGGTTA TCTGGCAAAT GTATTGTATT TCATGTCGAA TAAGCTTAGA
  GATTTTTTTT TATTTTTTTA TTTTTTGCAT GTCTACATGA AACCCAATCT GTGCACAACC
  R
  GGAGAGCCCG AAGGAATGGT GGCTGGAACT CCTGATGGAT GGGAGGAGTG CCACACCGGG
  CACTCCAGAG GGCAGCATAT CTGCTTCCCA CCAGCAGTGA GACCACTGTG TGCCTCAGTT
  TGAATAGCAG AGAAGCGTAG GTTTATATAG CTACTTATCT ATTTGTTTAC AACTTAAAAA
  TGATGTATTT GACAAATGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45475528	mCV25235078	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss135877568	ENSMUSSNP5752994	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30892812					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127797003 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	985 bp distal
Rr584917	regulatory region 584917	1272 bp distal