rs30891574 SNP Detail

Summary

• ID
  rs30891574
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9615643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTT TAGGAAAATG CACCCTTCCC
  Y
  CTCCCAGGAA GACTGGGTCT TCCGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45475253	mCV23339135	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss134576413	ENSMUSSNP3429526	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss320651448	CHEV_3_9550583	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30891574					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9615643 () rs orientation: forward

Symbol	Name	Function Class
Rr573443	regulatory region 573443	403 bp proximal
Rr573444	regulatory region 573444	1772 bp proximal
Zfp704	zinc finger protein 704	Intron