rs30891316 SNP Detail

Summary

• ID
  rs30891316
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115995349 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCA GCCCTTAAAG CATGATCTTA
  Y
  CTACCAGCCT AAAGGAATCA CAGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45974973	mCV22285920	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	T
ss133574551	ENSMUSSNP6548486	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
ss321917123	CHEV_6_115968406	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30891316					SNP	T	T	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115995349 () rs orientation: forward

Symbol	Name	Function Class
Rr637138	regulatory region 637138	584 bp distal
Rr637139	regulatory region 637139	306 bp distal
Tmcc1	transmembrane and coiled coil domains 1	223 bp downstream