rs30890710 SNP Detail

Summary

• ID
  rs30890710
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121079358 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCACAGGGA TAGGGCTGAC
  TGCAGTCTGA CCCTTATTTT CTTCTCCTGG TTTCCGTGGA AAGGCTGCAT CTGTTACTTT
  TCTGTTGCTG TTATAAAACA CCATGACCAG GTCAACTTAC AGAAAGAAGT GTTTATTTGG
  GCTTACAGTC CAGAGGGATA AGTTTCCTGG TGGTGAATGG GCACACCAGC GTTCAGCAGG
  Y
  GTAGCTACCT AGCGGCAGGA ACAGCAATCT AGTTGTTCAC ATCTAGAACA GCAAGTGCAA
  AGCAGACAAT GACTGTAAAT ACGAGAGGCT CTTTACTCCC AAGGCTCATC CCCAGCGGTA
  AGACTTCCTC CAGCAAAGCC ACCTCGCCTA AGCCTCAGAG TGACACCAAA TGGGAACCAA
  GTGCTCCAAT GCCCGAGACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45477191	mCV23993554	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss135717546	ENSMUSSNP5455173	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30890710					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121079358 () rs orientation: forward

Symbol	Name	Function Class
Rr584034	regulatory region 584034	42 bp distal
Rr584035	regulatory region 584035	769 bp proximal
Rr584036	regulatory region 584036	1322 bp proximal
Rr584037	regulatory region 584037	1655 bp proximal