rs30870324 SNP Detail

Summary

• ID
  rs30870324
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57354127 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAACTGTT TCCCTCTTCT
  GGAGTGTCTG AAGACAGCTT CAGTGTACTT ACATATAATA AATACATAAA TATTTTTAAA
  AAATAAGCAA AATTTTTAAA AAATCAGACA GAACAAGAGG TGGTTGAAAC ACAGGCATGA
  TGTGGAGCTC ATGTGGATGG AGTAACATGC TGTTCTTTAT TCTTGTGATA TACATGATAT
  R
  CGTGTCCTGT AGAAATGAGA AGCCTTTATC ACAGGACTTG AAGGTCAGAG GCATTAAGGG
  GAATCCTGGG AAAGTGGAGA GTTGAAGAGC CAGTGTGTAT ATTATAGAGG TGAGGTCATG
  GATCAGCAAT AGTCCATACG AGCTAACAGG TAGCTGCTGC TTCCCCCTGC CCACCAGGAG
  CTCAAGAGTC CTATCTGGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45474875	mCV24427984	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss135201368	ENSMUSSNP94951	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30870324					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57354127 () rs orientation: forward

Symbol	Name	Function Class
Rr577097	regulatory region 577097	501 bp distal
Rr577098	regulatory region 577098	1170 bp proximal
Rr577099	regulatory region 577099	1370 bp proximal
Rr577100	regulatory region 577100	1812 bp proximal
Rr577101	regulatory region 577101	1972 bp proximal