rs30869630 SNP Detail

Summary

• ID
  rs30869630
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:63237225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACTTGCTG AGTAATTTGT
  TTTCCTTAAT GTATTTTTTT TAATAGTTTG ACCAGCCTCG ACTTGGCCTC CCTTCCAGAG
  ACTACTATGA GTGCACTGGA ATATATAAAG AGGTAAATAA AAGCAAGGGG AGAAAAGAAT
  CAGACACAGC TACAGAGTCA TCTGTGAAAA CTATTCTAAT AATGAAAAGG ACTAGAGCCA
  M
  ATTTAAGCTC TTTACAATCT TTGCTGGGGA AAGACCAAAG CAAAAGAGTC CTGAAGTTCC
  TTTGATAGAA TGAACATTGT GACTTGACTA ATAGAAATCA AACAAGAAAG CTTGAAATTC
  CTCATGTGAA TTTTGATTCT TGGTTTTTAA GTCACATAGT CTAGTTTTTA AAGTCGCTTT
  AAAAATTTCC ATTTATGTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46992500	NES10783527	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	C	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30869630					SNP	A	A	A	A	A	A	A	A	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46992500	NES10783527	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:63237225 () rs orientation: forward

Symbol	Name	Function Class
Mme	membrane metallo endopeptidase	Intron
Tssr29369	transcription start site region 29369	1860 bp upstream