rs30866962 SNP Detail

Summary

• ID
  rs30866962
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137664535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGATGCAAT TTCAGGTGAG
  CCTCTTGTCT GATGACTGTG TGGGAACGTC TCAATCAAAA TATATCGCAT TCACTTTGGT
  CCCAGCCTTG AAATCTGCCA GAAAGCAAGA TGTGTATGCA CATCCATTCG CCATCCCCTC
  ATTTTGAGAA GGTCCAGTAA TGAGTACAGA GAAGCATAAA AAAGATTTAA ATAGTGTCTA
  R
  GAAAGAAGTT TAAATGAAAG AATTAACTTT ACTTAAAGAG GTGGCAAACA GATAACAATA
  GTGGTTTTGA TGGCTACAGG ATTCCTAAAA GATACTCATC CCTTCATTTA TTTCATTTAT
  TTCATTTATT TCTTCACTGA TAGCAAATAT GGGAGGAACA AAAGGAGAGG CATTCAAAAA
  AAGAATGTGG GGGCTGGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	DBA/2J	LG/J	NZW/LacJ	SM/J
ss46992865	NES10880176	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	G		G
ss320977281	CHEV_3_137621738	CHEVERUD	SCREENING_POP	f	SNP					A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	DBA/2J	LG/J	NZW/LacJ	SM/J
rs30866962					SNP	G	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46992865	NES10880176	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137664535 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dapp1	dual adaptor for phosphotyrosine and 3-phosphoinositides 1			Intron
				Noncoding-Transcript-Variant
Rr586035	regulatory region 586035			197 bp distal
Rr586036	regulatory region 586036			832 bp proximal