rs30865673 SNP Detail

Summary

• ID
  rs30865673
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137507303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGGATAC AAGGGAGGGA
  GGAGAGAAAA AGAAAAGAAA AAAATATCTC TACAGCCAGC ATGACTGCTC ATGCCTGCAA
  GCCCAGGACC TGAGACACTA AGGCAAGTGG ATCTGTACAG CCAGTTTGGA CCACGGTAAG
  AAAAAACTCT GCCTCAAAAA CCAGAATCAG AATTCATTCC CTAAGAACAC CTTAAACAAC
  K
  TAGTGTCAGA AGCCTCCTAA ACCAGACTCT GGCTACTGAT AAGATACAAG GGTGTGGCTC
  CTGAGAAGCC CCACCCACAG CACCTGCACT GGGTGCCCCC TTCCTTAGGC ACTCTCTCCT
  TTAATGCCAG TCATTAAATC TGCATTAAAG GTGTTGCCTC AGAAACTCTA ACTTTGCTTC
  CTACTGACGC AGCCTGGAAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss46991817	NES10886581	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs30865673					SNP	T	T	T	T	T	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46991817	NES10886581	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137507303 () rs orientation: forward

Symbol	Name	Function Class
Gm31678	predicted gene, 31678	within coordinates
Rr585983	regulatory region 585983	within coordinates