GCAGCCACAG GGGTGCTATC AGAACTTGTG TGGGCAGAGC AACCCAGGCT GGGCTAATAG GCTAGACCAC AGAGATATAG ACCAAGCACA TTGGTCTCTA TGGCCCCAAA CTTAATGGAC AGTGCTTGAA TCACTTGGCT GGCTACTTGC TGAAGCAGCT GATGAGGTAG GTCACAGGCT CAGATCTGAT CTCCAAAGGA K CTTAGTGGCT CTCAAGCAAG ATGCACAGCT CACTCTATGT TTCACAGGCT TGCTACCTTG CCTCTCTGTT GAGGTGGTAC AAAGACAGAC AGACAGACAG ACAGACAGAC AGACAGACAC ACACACACAC ACACACACAC ACAGAGGCAA TAGGCAGACA CACACAGTTC AGCTTGTTTT GTTGAAGCTG CTAGCCCTGT K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss49677530 | NES12989609 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs30861374 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss49677530 | NES12989609 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr1:134602472 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr418973 | regulatory region 418973 | 81 bp distal | ||||||
Rr418974 | regulatory region 418974 | 228 bp distal | ||||||
Syt2 | synaptotagmin II | Intron |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/25/2025 MGI 6.24 |
![]() |
|