rs30861183 SNP Detail

Summary

• ID
  rs30861183
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114442087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAGACTCAAG GAATCTTCCG GATTCTTAAA TTAGTCTTTT GAGTCCCTGT TATCTCAGGT
  AAATTGATAC TGTTGGTTTT CTTGTGGTAT CTTTGACTCC TGACTTCAGC AATGTTTCCT
  CACAGTCTGT TTCACTCATT GTCCAAGTTC CACCTAAAGT TTTTTTCCCA GTCTGACACT
  TGTAGTGACT CCTTCTCAAG AAAGAAAAGC TTTTCTATTA GTAATTAATC TATGTGCATA
  GAAATTAATA AAAAGTATCA TTACTAAATA TATAAACACA CACTACACAT ACACACACAA
  R
  CAAGCTAAAA CCCAAACATT TAACTTATTT CCCTACACCT TAGCATTATA CATTATATAC
  ATATGTAAAC CCTTAAATAT ATAAACCCTT AAAACCTTTA AGTCCTTGCC TCTTATTATA
  GCTGCAACAA CTTAAACAGA GACAGGAGAC ATAAAGTCTG TGTACGTGGG CATAAGTGAG
  ATTTACACTA AAAGATATTA TCAGATTTTA TTATTTATTA ATTTTTAGAA CTCATTTTCT
  ATGTTTTATT GAAAATAGAT GTTCACTCAG TATATTACGA ATATGATTGC CCTTCCCCAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss46451639	mCV22907327	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs30861183					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114442087 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	540 bp downstream
Tssr3975	transcription start site region 3975	1024 bp downstream
Tssr118082	transcription start site region 118082	1039 bp downstream