rs30858347 SNP Detail

Summary

• ID
  rs30858347
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121080746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCACATGGT TGCTCACAAC ATTCGTAATG AAATCTGATG
  CCCTCTTCTG GGGTGTCTGA AGACAGCTGC AGTGTACGTA CATATAATAA ATAAATAAAT
  M
  TTAAAAATAA AAATAAAATA AAATAATGAG ACAACATTAA AATTCAGTTC AAGAGCCCAG
  CTAGCTCAGT TGGTAGGACA TGAGACTCTT TAATCTAAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45472858	mCV23993536	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss135717564	ENSMUSSNP6817433	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30858347					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121080746 () rs orientation: forward

Symbol	Name	Function Class
Rr375663	regulatory region 375663	630 bp upstream
Rr584034	regulatory region 584034	1430 bp distal
Rr584035	regulatory region 584035	598 bp distal
Rr584036	regulatory region 584036	45 bp distal
Rr584037	regulatory region 584037	267 bp proximal