rs30856819 SNP Detail

Summary

• ID
  rs30856819
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102181693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGCCCTGC TTGCTTCTCC
  CACCATGGAA CCTTCTGCTC TTCCACCATG GTACTAGGTA GCAGGAGGCC TTCAGCAGAA
  GCTGAACAGT CCCCAGCACC TTGCTCTTAG ACTTCCCAGC CTCCAGAGCT GTGAACTAAA
  TCAGGTTTTA TTCTTTATGT ATTATTGAGT CTCAGGTAAT CTGGGATTGT CACAGAAAAC
  R
  GATCACAACA CCGTTCATCT CTACATTGCC TGCTGCCAGA GTTTTGTTAA CCTGACACAA
  CGGAACCATA CCTGGGAAGA GGGCATCTCA CCTGAGGAAT TGTCTCCATT AGTGGGCTTG
  TAGGAATGTC CGTGGGGTAT TTTCTTGATT AATGATTGAT CCACACTAGA AGGCCCGGCC
  CACCATGGGT TGTGCAATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45473033	mCV25068827	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss135555688	ENSMUSSNP4538938	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
ss320855293	CHEV_3_102078300	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30856819					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102181693 () rs orientation: forward

Symbol	Name	Function Class
A230001M10Rik	RIKEN cDNA A230001M10 gene	within coordinates
Gm65464	predicted gene, 65464	within coordinates
Rr582219	regulatory region 582219	877 bp proximal
Rr582220	regulatory region 582220	1357 bp proximal
Rr582221	regulatory region 582221	1612 bp proximal