rs30854869 SNP Detail

Summary

• ID
  rs30854869
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119541555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCAAAAGG GATATGAGCA TGGCAGACAT AGTATATTTT
  GTTTGGTTTG GTTTGGTTTT TGTTGTTGTT TTCTTTTTCT TTTCTTTTCT TTTCTTTTCT
  Y
  TTTTTTTTCT TCGAGACAGG GTTTCTCTGT GTAGCCCTCG ATGTCCTTGG AGCTCACTCT
  GTAGACCAGG CTGGCCTCGA ACTCAGAAAT CCTCCTGCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45970474	mCV22718294	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30854869					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119541555 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	1630 bp upstream
Rr637713	regulatory region 637713	1735 bp distal
Rr637714	regulatory region 637714	916 bp distal
Rr637715	regulatory region 637715	926 bp proximal