rs30853067 SNP Detail

Summary

• ID
  rs30853067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:152063187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTGATTGGTA TTAAAATAAA AGACACAAAT TTTGGTGGGT AGGAAAGGAG AGGTGGATTT
  GGGGAAGAGT TGAGGAAGGG AGAAAATAAT GATCAAAGAT GTGTGAAATT CTCAAAGAAC
  TATTAAGTCA GGTGTGTGGA ACACACTTTT AATCCCAGCA CTTGGAAGGC AAAGGCAGGT
  GGATCTTGAT GAGTTTGAAG CCCATCTGAT CTACATAATG AGTCCCAGGA CAGCCAGAGC
  TCCCTGGTGA GACCCTGTCT CAAAAAACAG GCAAACAAAA CAAGCCTGTG ATGTTGTGCA
  Y
  CGTCATTTCC AGCACTTGGG AGGCAGAGAC CAGAGGGTCT TTTATGAGTT TAGGCCAGTC
  TGGTCTACTC AGTGACTTCC AGGGCAGCCA AACTACACAG TGAAACTTTG TCTCAAATCA
  ATCTACCCAT CGATCAGTCA GTCATGAAAA TTTATTTATT CCACCGGCTG CAGGTGTGTC
  TGAACATTTT TGGCAGGGAG AGCATGTATA TTCCTTATTT TATCTTTTCT TTAGCCAGTT
  TTAGCTTGTT AAGATTTTGT AATTAAGTTT TGGGTCACCT TTTCTGTAGG TTTTGCCTGA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45473188	mCV25311404	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30853067					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152063187 () rs orientation: forward

Symbol	Name	Function Class
Rr587538	regulatory region 587538	1534 bp distal
Rr587539	regulatory region 587539	379 bp distal
Usp33	ubiquitin specific peptidase 33	Intron