rs30852940 SNP Detail

Summary

• ID
  rs30852940
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:85986808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATA TGCATGTGCG CATGCATGTG
  Y
  GCCTGTATGC CAGAGGCTCT GTGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45972392	mCV27547736	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss133353905	ENSMUSSNP1567482	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss321845451	CHEV_6_85959820	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30852940					SNP	T	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:85986808 () rs orientation: forward

Symbol	Name	Function Class
4930553P18Rik	RIKEN cDNA 4930553P18 gene	473 bp downstream
Gm33319	predicted gene, 33319	1917 bp upstream
Gm66378	predicted gene, 66378	within coordinates
Rr633312	regulatory region 633312	218 bp proximal
Rr633313	regulatory region 633313	314 bp proximal